SysteMHC v.231201
Home Datasets Download Help About Update

SysteMHC Atlas Statistics




Human Data Overview[1]


MHCClass Organism Unique Samples Unique Peptides Modified Peptides Unmodified Peptides Binders Modified Binders Unmodied Binders Unique Alleles [2]
I Human 1785 1354052 248285 1197928 449731 55209 434215 149
II Human 951 1168570 319288 957111 320999 76250 289435 139


Tissue Types

Cell Types

num_samples
BloodKidneyColonOvaryLiverSkinBrainMelanomaLungSynoviumColorectalThyroidBreastSmallintestineSpleenAortaLymphnodeBladderEsophagusHeartAdrenalglandCerebellumEnteric canalBonemarrowMuscleRenalStomachTestisTongueGlioblastomaTracheaPancreasProstateThymusGallbladderUterusForskinMyelonBursal Spinalcord
num_samples
Lymphoblast cellColorectal cellExpi293PBMCMelanomaT lymphoblastOvary cellHccLung cellRAThyroid cellMeningioma cellRenal cellSmallintestine cellSpleen cellBrain cellKG1Aorta cellLiver cellBladder cellEsophagus cellHeart cellKidney cellAdrenalgland cellCerebellum cellBonemarrow cellMuscle cellStomach cellTestis cellTongue cellSkin cellColon cellTrachea cellCd4+ pbmcGBM cellJurkatMDA-MB-231 cellPancreas cellProstate cellBreast cellMacrophageThymus cellJYMaver-1 Adenocarcinoma cellGallbladder cellGlioma cellSynovial cellFibroblastUterus cellA375 cellB cell lineC8166K562Mutz-3B721.221CD45DOHH2HROG02HROG17Lnt-229Myelon cellT98gThp1 cellU-87 cellBasal cellCM467HEK293THcc1143Hcc1937Hct116Supb15-rtSupb15-wtT cell51AL cell55A3 cell58A cellGl261IHW01070 cell lineIslet cellPAMsPRBC

Disease Types

Antibody Types

num_samples
Colorectal carcinomaGlioblastomaOvarian cancerLymphomaMelanomaHepatocellular carcinomaMetastaticAcute myeloid leukemiaRheumatoid arthritisMeningiomaBreast carcinomaRenal cell carcinomaChronic lymphocytic leukemiaLyme arthritisLung cancerSarcoidosis Brain tumorSpongioblastomaLong-term gliomaLung adenocarcinomaLung non-small cell cancerLung squamous cell carcinomaPrimary leukemicIdiopathic interstitial pneumoniaIdiopatic pulmory fibrosis Autoimmune diabetesGoodpasture diseaseMalariaMalignant gliomaMarek diseasePorcine reproductive and respiratory syndrome
num_samples
W6/32TV39,L243TAL-1B5HB145L2432.12.E11 (anti-DQ2)IgG1,IgG2aSPV-L3TV39HB245HB956H9, 3F5LB3.1B721HB298RM5.112B8.11.2 (IgG2b)2G11AG2.42.7B22ILA21PT85AY-3PY3

MS Instruments

Fragmentation Methods

num_samples
Orbitrap Fusion LumosQ-ExactiveOrbitrap XLQ-Exactive HFQ-Exactive PlusLTQ Orbitrap EliteLTQ OrbitrapOrbitrap EliteTriple-TOF 5600Orbitrap VelosLTQ-FT
SysteMHC IDSample IDOrganismTissue TypeCell TypeDisease StateAntibodyMass SpectrometerFragmentation Method
SysteMHC ID
Sample ID
Organism
Tissue Type
Cell Type
Disease State
Antibody
Mass Spectrometer
Fragmentation Method
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_JY Human Blood Lymphoblast cell W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy18 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy19 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy21 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy29 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy30 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy32 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy33 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy34 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy48 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy54 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy83 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy85 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy89 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00001 SYSMHC00001_Kowalewskid_160207_Rammensee_Germany_PBMC_Buffy94 Human Blood PBMC W6/32 Orbitrap XL CID
SYSMHC00002 SYSMHC00002_THP1_001 Human Blood Thp1 cell W6/32 Q-Exactive HCD
SYSMHC00002 SYSMHC00002_THP1_BCG_001 Human Blood Thp1 cell W6/32 Q-Exactive HCD
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy03 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy102 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy22 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy23 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy31 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy40 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy42 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy45 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy46 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy52 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy53 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy61 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy63 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy64 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy65 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy74 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy75 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy82 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy88 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy92 Human Blood PBMC Orbitrap XL CID
SYSMHC00003 SYSMHC00003_Kowalewskid_160817_Rammensee_Germany_PBMC_Buffy95 Human Blood PBMC Orbitrap XL CID
SYSMHC00004 SYSMHC00004_Fib Human Fibroblast Q-Exactive HCD
SYSMHC00004 SYSMHC00004_JY Human Blood JY Q-Exactive HCD
SYSMHC00005 SYSMHC00005_Fib Human Fibroblast W6/32 Q-Exactive HCD
SYSMHC00005 SYSMHC00005_HCC1143 Human Breast Hcc1143 W6/32 Q-Exactive HCD
SYSMHC00005 SYSMHC00005_HCC1937 Human Breast Hcc1937 W6/32 Q-Exactive HCD
SYSMHC00005 SYSMHC00005_HCT116 Human Colon Hct116 W6/32 Q-Exactive HCD
SYSMHC00005 SYSMHC00005_JY Human Blood JY W6/32 Q-Exactive HCD
SYSMHC00005 SYSMHC00005_SupB15-RT Human Blood Supb15-rt W6/32 Q-Exactive HCD
SYSMHC00005 SYSMHC00005_SupB15-WT Human Blood Supb15-wt W6/32 Q-Exactive HCD
SYSMHC00006 SYSMHC00006_hassanc_160817_vanveelen_netherlands_HHC_IEF Human Blood Lymphoblast cell W6/32 LTQ-FT CID
SYSMHC00006 SYSMHC00006_hassanc_160817_vanveelen_netherlands_HHC_SCX Human Blood Lymphoblast cell W6/32 LTQ-FT CID
SYSMHC00006 SYSMHC00006_hassanc_160817_vanveelen_netherlands_JY_C18 Human Blood JY W6/32 LTQ-FT CID
SYSMHC00006 SYSMHC00006_hassanc_160817_vanveelen_netherlands_JY_IEF Human Blood JY W6/32 LTQ-FT CID
SYSMHC00006 SYSMHC00006_hassanc_160817_vanveelen_netherlands_JY_SCX Human Blood JY W6/32 LTQ-FT CID
SYSMHC00007 SYSMHC00007_shraibmanb_160819_admon_Israel_LNT229 Human Brain Lnt-229 Brain tumor W6/32 Q-Exactive Plus HCD
SYSMHC00007 SYSMHC00007_shraibmanb_160819_admon_Israel_LNT229D Human Brain Lnt-229 Brain tumor W6/32 Q-Exactive Plus HCD
SYSMHC00007 SYSMHC00007_shraibmanb_160819_admon_Israel_T98G Human Brain T98g Brain tumor W6/32 Q-Exactive Plus HCD
SYSMHC00007 SYSMHC00007_shraibmanb_160819_admon_Israel_T98GD Human Brain T98g Brain tumor W6/32 Q-Exactive Plus HCD
SYSMHC00007 SYSMHC00007_shraibmanb_160819_admon_Israel_U87 Human Brain U-87 cell Brain tumor W6/32 Q-Exactive Plus HCD
SYSMHC00007 SYSMHC00007_shraibmanb_160819_admon_Israel_U87D Human Brain U-87 cell Brain tumor W6/32 Q-Exactive Plus HCD
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject3_rep3 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject3_rep4 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject3_rep5 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject4_rep3 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject4_rep4 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject4_rep5 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00008 SYSMHC00008_laumontc_160105_perreault-thibault_cada_LCL_subject4_rep6 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_M1 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_M2 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_M3 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_M4 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_R1 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_R2 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_R3 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00009 SYSMHC00009_gradosd_140409_perreault-thibault_cada_LCL_R4 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_PF1_Subject_04 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_RT_Subject_10 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_01 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_02 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_03 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_04 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_05 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_06 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_07 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_08 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_09 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_10 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_11 Human Blood Lymphoblast cell Orbitrap Elite CID
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_12 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_13 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_14 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_15 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_16 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_17 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_Subject_18 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_pat_CELG_Subject_11 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_pat_C_Subject_08 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_pat_J_Subject_09 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_pat_MA_Subject_03 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_pat_PF1_Subject_04 Human Blood Lymphoblast cell Q-Exactive Plus HCD
SYSMHC00010 SYSMHC00010_gradosd_160630_perreault-thibault_cada_LCL_pat_RT_Subject_10 Human Blood Lymphoblast cell Q-Exactive Plus HCD
Showing 1 to 11 of 2,452 entries

[1] Peptides filtered at the 1%FDR at the peptide level.

[2] Alleles to which identified peptides have been assigned to.